| Season Three Episodes | |
Episodes from other RPGs are included because they feature characters from Starbase 901.
| # | Title | Author |
| 301 | Yellow Alert (Season Premire) |
Captain Richard Wallace |
| 302 | Escaping the Past (Part 1 of 2) | Amelia Donaghy |
| 303 | Escaping the Past (Part 2 of 2) | Amelia Donaghy |
| 304 | The Infamous Monica | Lieutenant Commander Garek Loran |
| 305 | Out For a Stroll | Lieutenant Commander Vince Kelly |
| 306 | Daily Patrol | Lieutenant Sovick |
| 307 | Patching Up a Few Things | Dr. Alistair Scott Cherrin |
| 308 | Old Friends | Captain Richard Wallace |
| 309 | Checking Up | Lieutenant Deveraux |
| 310 | Briefing | Amelia Donaghy |
| 311 | Hasty Departure | Captain Tarik |
| 312 | On the Surface | Petty Officer Woodrow Murphy |
| 313 | Son'a Policy | Lieutenant Commander Vince Kelly |
| 314 | Help | Captain Richard Wallace |
| 315 | Kassia | Kassia |
| Command Post 114 |
Past Associate | Jacen Klevin |
| 316 | It Has Begun | Petty Officer Woodrow Murphy |
| 317 | Orders | Lieutenant Commander Vince Kelly |
| 318 | Oh Lord Have Mercy on Those Who are Helpless | Captain Richard Wallace |
| 319 | Perimeter | Petty Officer Woodrow Murphy |
| 320 | The Town | Captain Richard Wallace |
| 321 | Getting Ready | Cadet 3rd Class Ethan Razek |
| 322 | Curiosity Killed the Cat? | Kassia |
| 323 | Welcome to the Surface... Son'a Style (Part 1) |
Lieutenant Paul Deveraux |
| 324 | Leaving by the Back Door (Part 1 of 2) |
Amelia Donaghy |
| 325 | Leaving by the Back Door (Part 2 of 2) |
Amelia Donaghy |
| 326 | Welcome to the Surface... Son'a Style (Part 2) |
Lieutenant Paul Deveraux |
| 327 | Preparing for Battle | Doctor Alistair Scott Cherrin |
| 328 | Tooth and Nail | Petty Officer Woodrow Murphy |
| 329 | Final Battle | Captain Richard Wallace |
| 330 | Relocation | Lieutenant Commander Garek Loran |
| 331 | Come On! | Lieutenant Commander Vince Kelly |
| 332 | Alamo | Captain Richard Wallace |
| 333 | Home | Captain Richard Wallace |
| 334 | New Toys | Lieutenant Lee Carter |
| 335 | Discovering the Enemy | Lieutenant Paul Deveraux |
| 336 | On the Ground | Captain Tarik |
| 337 | Search Party | Captain Richard Wallace |
| 338 | Little Ships | Lieutenant Paul Deveraux |
| 339 | Ship Found | Commander Vince Kelly |
| 340 | Looking for Life | Captain Richard Wallace |
| 341 | A Tragic State of Affairs | Captain Tarik |
| 342 | The Reality of War | Lieutenant Paul Deveraux |
| 343 | After Effects | Lieutenant Paul Deveraux |
| 344 | Ground Assault | Lieutenant Paul Deveraux |
| 345 | Hide and Seek | Amelia Donaghy |
| 346 | In Command, if Only for a Day | Commander Garek Loran |
| 347 | Engineers... | Lieutenant Lee Carter |
| 348 | Taking the Plunge | Amelia Donaghy |
| 349 | Reality's Nightmare | Kassia |
| 350 | It Began with a Roast Beef Sandwich | Captain Tarik |
| 351 | Battle of the Sexes | Commander Garek Loran |
| 352 | Duty | Captain Richard Wallace |
| 353 | Information | Commander Vince Kelly |
| 354 | Brownian Motion | Kassia - Captain Tarik |
| 355 | Back to Reality | Lieutenant Paul Deveraux |
| 356 | The Day After | Lieutenant Kimberly Tycho |
| 357 | Future's Path | Kassia |
| 358 | A Time to Ponder and Reflect | Captain Richard Wallace |
| 359 | Escapes | Kassia - Captain Tarik |
| 360 | Could It Be? | Lieutenant Paul Deveraux |
| 361 | Schplict Anyone? | Lieutenant Lee Carter |
| 362 | Life's Dealt Hand | Senior Petty Officer Woodrow Murphy |
| 363 | Taking a Trip | Commander Vince Kelly |
| 364 | Worse Then Expected | Commander Garek Loran |
| 365 | We Couldn't Be | Commander Vince Kelly |
| 366 | Scepticism | Lieutenant Paul Deveraux |
| 367 | A Troubling Situation (Season Finale) |
Captain Richard Wallace |